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ChromOptimise
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Grade
Name
Complexity
Churn
Issues
C
Rscripts\HeritabilityPlots.R
 34 6
A
JobSubmission\3_OptimalNumberOfStates.sh
 15 -
A
Rscripts\CalculateBIC.R
 15 -
A
JobSubmission\5_PartitionedHeritability.sh
 14 -
A
JobSubmission\4_ReferenceLDSCore.sh
 12 -
A
Rscripts\RedundantStateChecker.R
 11 4
A
Rscripts\PlotLikelihoods.R
 11 -
A
Rscripts\SimilarEmissions.R
 8 3
A
Rscripts\CreateAnnotationFile.R
 8 1
A
Rscripts\FlankingStates.R
 7 2
A
Rscripts\IsolationScores.R
 7 4
A
supplementary\Redundancy_Threshold_Optimisation\JobSubmission\Execute_Redundancy_Metrics.sh
 7 -
A
JobSubmission\2_batch_CreateIncrementalModels.sh
 7 -
A
Rscripts\BinarytoBed.R
 7 1
A
Rscripts\CheckModelSubset.R
 6 7
A
supplementary\Redundancy_Threshold_Optimisation\JobSubmission\Generate_Big_Model.sh
 6 -
A
Setup\setup
 6 -
A
Rscripts\BimtoBed.R
 6 1
A
ChromOptimise.sh
 6 -
A
supplementary\Recreate_Transition_Heatmap\JobSubmission\Recreate_Transition_Heatmap.sh
 5 -