master
MiCoNE
Repository badge with BMinus rating
View on GitHub
Grade
Name
Complexity
Churn
Issues
A
micone\pipelines\templates\denoise_cluster\chimera_checking\remove_chimeras.R
 3 2
A
micone\pipelines\templates\network_inference\bootstrap\calculate_pvalues.sh
 3 1
A
micone\pipelines\templates\tax_assignment\assign\add_md2biom.py
8 3 3
B
docs\conf.py
 3 15
A
tests\pipelines\test_pipeline.py
4 3 6
A
micone\setup\initialize.py
4 3 2
A
micone\pipelines\templates\sequence_processing\trimming\trimming_paired.R
 3 -
A
micone\pipelines\templates\sequence_processing\demultiplexing\export_sequences.sh
 3 1
A
micone\pipelines\envs\micone-mldm\post_install.sh
 2 -
A
micone\pipelines\envs\micone-propr\env.yml
 2 -
A
micone\pipelines\envs\micone-propr\post_install.sh
 2 -
B
micone\main\lineage.py
48 2 10
A
micone\pipelines\envs\micone-qiime2\env.yml
 2 -
A
micone\pipelines\envs\micone-qiime2\post_install.sh
 2 -
A
micone\pipelines\envs\micone-spring\env.yml
 2 -
A
micone\pipelines\envs\micone-spring\post_install.sh
 2 -
A
micone\pipelines\templates\denoise_cluster\chimera_checking\import_files.sh
 2 -
A
micone\pipelines\templates\network_inference\direct\harmonies.R
 2 1
A
micone\pipelines\__init__.py
 2 1
A
micone\pipelines\envs\micone-cozine\env.yml
 2 -