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MiCoNE
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Issues
A
micone\pipelines\templates\network_inference\direct\spieceasi.R
 4 1
D
tests\conftest.py
47 4 23
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micone\pipelines\templates\network_inference\correlation\sparcc.sh
 4 -
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micone\pipelines\templates\network_inference\correlation\propr.R
 4 -
D
tests\config\test_params.py
19 4 19
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micone\pipelines\templates\denoise_cluster\otu_assignment\make_biom_repseqs.py
6 4 5
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micone\pipelines\templates\sequence_processing\trimming\trimming_paired.R
 3 -
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micone\pipelines\templates\sequence_processing\demultiplexing\export_sequences.sh
 3 1
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micone\pipelines\templates\tax_assignment\assign\add_md2biom.py
8 3 3
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micone\pipelines\templates\denoise_cluster\otu_assignment\cluster_de_novo.sh
 3 -
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micone\pipelines\templates\denoise_cluster\otu_assignment\cluster_open_reference.sh
 3 -
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micone\pipelines\envs\micone-sparcc\env.yml
 3 -
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.readthedocs.yml
 3 -
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micone\pipelines\templates\network_inference\bootstrap\calculate_pvalues.sh
 3 1
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micone\pipelines\templates\denoise_cluster\chimera_checking\remove_chimeras.R
 3 2
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micone\setup\initialize.py
4 3 2
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.pre-commit-config.yaml
 3 -
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micone\pipelines\templates\denoise_cluster\otu_assignment\cluster_closed_reference.sh
 3 -
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micone\pipelines\command.py
29 3 1
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micone\pipelines\templates\network_inference\direct\spring.R
 3 1