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MiCoNE
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A
env.yml
 12 -
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micone\pipelines\templates\network_inference\direct\mldm.R
 11 2
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micone\main\network_group.py
88 10 18
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micone\cli.py
28 9 3
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micone\pipelines\templates\network_inference\network\make_network_without_pvalue.py
3 8 6
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micone\pipelines\templates\denoise_cluster\otu_assignment\dada2_paired.R
 6 -
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micone\pipelines\templates\network_inference\network\make_network_with_pvalue.py
3 6 5
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micone\pipelines\templates\denoise_cluster\otu_assignment\dada2_single.R
 6 -
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micone\pipelines\templates\denoise_cluster\otu_assignment\deblur.sh
 6 -
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tests\main\test_network.py
18 5 17
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micone\pipelines\templates\network_inference\network\merge_pvalues.py
2 5 2
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micone\pipelines\templates\network_inference\network\create_consensus.py
2 5 5
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micone\pipelines\templates\otu_processing\transform\fork.py
3 5 5
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micone\setup\environments.py
12 5 -
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micone\pipelines\templates\denoise_cluster\otu_assignment\fastq2fasta.py
12 5 9
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micone\main\otu.py
46 5 9
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micone\__init__.py
 4 -
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micone\main\network.py
80 4 25
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micone\pipelines\templates\network_inference\direct\spieceasi.R
 4 1
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micone\pipelines\templates\network_inference\correlation\sparcc.sh
 4 -