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master
MiCoNE
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  • 489 issues
  • 1 pull request
  • 125 files
  • 1 active branch

CodeFactor Rating B-

  • {{format.Name}}
Grade
Name
Complexity
Churn
Issues
A
micone\pipelines\templates\denoise_cluster\chimera_checking\remove_chimeras.R
3 2
A
micone\setup\initialize.py
4 3 2
A
micone\conversion\network_converter.py
1 2 2
A
micone\pipelines\templates\otu_processing\transform\normalize_filter.py
4 4 3
A
micone\cli.py
28 9 3
A
micone\pipelines\templates\denoise_cluster\chimera_checking\create_seqtable.py
3 1 3
A
micone\pipelines\templates\tax_assignment\assign\add_md2biom.py
8 3 3
A
tests\data\examples\networks\copy_data.py
12 1 3
A
tests\conversion\test_taxmetadata_converter.py
1 2 3
A
micone\pipelines\templates\network_inference\bootstrap\filter.py
5 1 4
A
micone\pipelines\templates\network_inference\network\create_consensus.py
2 5 5
A
micone\pipelines\templates\network_inference\network\make_network_with_pvalue.py
3 6 5
A
micone\pipelines\templates\otu_processing\transform\fork.py
3 5 5
A
micone\pipelines\templates\denoise_cluster\otu_assignment\make_biom_repseqs.py
6 4 5
A
micone\pipelines\templates\network_inference\correlation\pearson.py
7 2 5
A
micone\pipelines\templates\network_inference\correlation\spearman.py
7 2 5
A
micone\pipelines\templates\network_inference\network\make_network_without_pvalue.py
3 8 6
A
micone\pipelines\templates\otu_processing\transform\group.py
1 2 6
A
micone\pipelines\templates\sequence_processing\trimming\quality_analysis_paired.py
25 1 6
A
micone\pipelines\templates\sequence_processing\trimming\quality_analysis_single.py
25 1 6
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