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MiCoNE
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Complexity
Churn
Issues
A
micone\validation\__init__.py
 2 1
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micone\utils\spinner.py
15 2 -
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micone\utils\__init__.py
 1 1
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micone\setup\initialize.py
4 3 2
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micone\setup\environments.py
12 5 -
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micone\setup\__init__.py
 2 1
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micone\pipelines\workflows\ta_op_ni\run.sh
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micone\pipelines\workflows\op_ni\run.sh
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micone\pipelines\workflows\ni\run.sh
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micone\pipelines\workflows\full\run.sh
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micone\pipelines\templates\tax_assignment\assign\train_classifier.sh
 1 -
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micone\pipelines\templates\tax_assignment\assign\import_references.sh
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micone\pipelines\templates\tax_assignment\assign\import_reads.sh
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micone\pipelines\templates\tax_assignment\assign\assign_taxonomy_naivebayes.sh
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micone\pipelines\templates\tax_assignment\assign\assign_taxonomy_blast.sh
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micone\pipelines\templates\tax_assignment\assign\add_md2biom.py
8 3 3
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micone\pipelines\templates\sequence_processing\trimming\trimming_single.R
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micone\pipelines\templates\sequence_processing\trimming\trimming_paired.R
 3 -
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micone\pipelines\templates\sequence_processing\trimming\quality_analysis_single.py
25 1 6
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micone\pipelines\templates\sequence_processing\trimming\quality_analysis_paired.py
25 1 6