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ViroConstrictor
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A
ViroConstrictor\workflow\main\scripts\concat_amplicon_covs.py
2 1 -
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.github\workflows\run_unittests.yml
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ViroConstrictor\genbank.py
5 1 -
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ViroConstrictor\workflow\main\scripts\extract_gff.py
0 1 -
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ViroConstrictor\workflow\main\scripts\extract_sample_from_fasta.py
6 1 -
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ViroConstrictor\workflow\main\scripts\fastqc.sh
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ViroConstrictor\workflow\main\scripts\filter_bed_input.py
0 1 -
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ViroConstrictor\workflow\main\scripts\group_aminoacids.py
13 1 -
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ViroConstrictor\workflow\main\scripts\prepare_refs.py
2 1 -
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ViroConstrictor\workflow\main\scripts\vcf_to_tsv.py
1 1 -
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ViroConstrictor\workflow\match_ref\scripts\count_mapped_reads.py
5 1 -
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ViroConstrictor\workflow\match_ref\scripts\filter_bed.py
0 1 1
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ViroConstrictor\workflow\envs\core_scripts.yaml
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ViroConstrictor\workflow\match_ref\scripts\filter_best_matching_ref.py
2 1 -
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ViroConstrictor\workflow\match_ref\scripts\filter_gff.py
0 1 1
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ViroConstrictor\workflow\envs\mr_scripts.yaml
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ViroConstrictor\workflow\match_ref\scripts\filter_references.py
4 1 -
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ViroConstrictor\workflow\helpers\base_script_class.py
0 1 -
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ViroConstrictor\workflow\helpers\containers.py
17 1 -
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ViroConstrictor\workflow_executor.py
7 1 -