merenlab/anvio

master

anvio

Grade	Name	Complexity	Churn	Issues
A	anvio\cli\get_codon_frequencies.py	52	2	3
A	anvio\cli\get_codon_usage_bias.py	72	2	3
A	anvio\cli\get_collection_info.py	1	2	-
A	anvio\cli\get_coverage_from_bam.py	41	2	2
A	anvio\cli\get_hmm_hits_per_gene_call.py	5	2	-
A	anvio\cli\get_metabolic_model_file.py	8	2	-
A	anvio\cli\get_pn_ps_ratio.py	4	2	3
A	anvio\cli\get_sequences_for_gene_calls.py	21	2	-
A	anvio\cli\get_sequences_for_gene_clusters.py	43	2	2
A	anvio\cli\get_sequences_for_hmm_hits.py	61	2	2
A	anvio\cli\get_short_reads_from_bam.py	1	2	-
A	anvio\cli\get_short_reads_mapping_to_a_gene.py	10	2	1
A	anvio\cli\get_split_coverages.py	47	2	2
A	anvio\cli\get_tlen_dist_from_bam.py	1	2	-
A	anvio\cli\help.py	1	1	-
A	anvio\cli\hmm_to_hmm_directory.py	11	3	-
A	anvio\cli\import_collection.py	45	2	3
A	anvio\cli\import_functions.py	7	3	3
A	anvio\cli\import_items_order.py	11	2	1
A	anvio\cli\import_metabolite_profile.py	2	2	-