merenlab/anvio

master

anvio

Grade	Name	Complexity	Churn	Issues
A	anvio\cli\get_metabolic_model_file.py	8	2	-
A	anvio\cli\import_metabolite_profile.py	2	2	-
A	anvio\cli\export_gene_calls.py	10	2	-
A	anvio\cli\import_protein_profile.py	3	2	-
A	anvio\cli\compute_gene_cluster_homogeneity.py	27	4	1
A	anvio\cli\import_taxonomy_for_genes.py	3	2	-
A	anvio\cli\export_gene_coverage_and_detection.py	18	3	3
A	anvio\cli\init_bam.py	6	2	-
A	anvio\cazymes.py	29	4	1
A	anvio\cli\integrate_trnaseq.py	22	1	-
A	anvio\cli\export_locus.py	1	2	2
A	anvio\cli\kofam_accessions_to_hmms_directory.py	41	1	1
A	anvio\cli\compute_metabolic_enrichment.py	1	3	-
A	anvio\cli\get_pn_ps_ratio.py	4	3	-
A	anvio\cli\compute_completeness.py	9	5	-
A	anvio\cli\estimate_metabolism.py	7	4	-
A	anvio\cli\get_sequences_for_gene_calls.py	21	4	-
A	anvio\cli\get_sequences_for_gene_clusters.py	43	4	2
A	anvio\cli\estimate_scg_taxonomy.py	4	4	-
A	anvio\cli\get_sequences_for_hmm_hits.py	61	4	2