merenlab/anvio

master

anvio

Grade	Name	Complexity	Churn	Issues
A	anvio\cli\gen_short_reads.py	14	2	-
A	anvio\cli\draw_kegg_pathways.py	58	2	2
A	anvio\cli\gen_user_module_file.py	15	2	1
A	anvio\cli\gen_variability_network.py	3	2	-
A	anvio\cli\compute_ani.py	0	2	-
A	anvio\cli\estimate_genome_completeness.py	48	2	3
A	anvio\cli\gen_variability_profile.py	2	2	-
A	anvio\cli\get_aa_counts.py	1	2	-
A	anvio\cli\estimate_genome_size.py	3	2	-
A	anvio\cli\get_codon_frequencies.py	52	2	3
A	anvio\cli\get_codon_usage_bias.py	72	2	3
A	anvio\auxiliarydataops.py	15	3	-
A	anvio\cli\compute_ani_for_fasta.py	8	2	2
A	anvio\cli\estimate_genome_taxonomy.py	1	2	-
A	anvio\cli\get_collection_info.py	1	2	-
A	anvio\cli\get_coverage_from_bam.py	41	2	2
A	anvio\cli\estimate_metabolic_independence.py	13	2	1
A	anvio\cli\get_hmm_hits_per_gene_call.py	5	2	-
A	anvio\cli\get_metabolic_model_file.py	8	2	-
A	anvio\cli\compute_bayesian_pan_core.py	19	3	1