merenlab/anvio

master

anvio

Grade	Name	Complexity	Churn	Issues
A	anvio\cli\gen_function_matrix_across_genomes.py	2	2	-
A	anvio\cli\gen_fixation_index_matrix.py	2	2	-
A	anvio\cli\gen_distribution_of_genes_in_a_bin.py	11	2	1
A	anvio\cli\gen_defense_finder_models_to_hmm_directory.py	7	2	-
A	anvio\cli\gen_contigs_database.py	1	2	-
A	anvio\cli\gen_CPR_classifier.py	4	2	-
A	anvio\cli\fix_homopolymer_indels.py	62	3	7
A	anvio\cli\find_misassemblies.py	26	2	1
A	anvio\cli\filter_hmm_hits_table.py	1	2	-
A	anvio\cli\filter_fasta_by_blast.py	8	2	1
A	anvio\cli\export_table.py	27	3	1
A	anvio\cli\export_structures.py	7	2	-
A	anvio\cli\export_state.py	6	2	-
A	anvio\cli\export_splits_taxonomy.py	1	2	-
A	anvio\cli\export_splits_and_coverages.py	4	2	-
A	anvio\cli\export_misc_data.py	5	2	-
A	anvio\cli\export_locus.py	1	2	2
A	anvio\cli\export_items_order.py	13	2	-
A	anvio\cli\export_gene_coverage_and_detection.py	18	2	3
A	anvio\cli\export_gene_clusters.py	3	2	-