merenlab/anvio

master

anvio

Grade	Name	Complexity	Churn	Issues
A	anvio\cli\compute_bayesian_pan_core.py	19	3	1
A	anvio\cli\get_sequences_for_gene_calls.py	21	2	-
A	anvio\cli\estimate_scg_taxonomy.py	4	3	-
A	anvio\cli\get_sequences_for_hmm_hits.py	61	2	2
A	anvio\cli\import_misc_data.py	7	3	1
A	anvio\cli\get_short_reads_mapping_to_a_gene.py	10	2	1
A	anvio\cli\experimental_organization.py	19	4	1
A	anvio\cli\get_tlen_dist_from_bam.py	1	2	-
A	anvio\cli\compute_functional_enrichment.py	1	2	-
A	anvio\cli\hmm_to_hmm_directory.py	11	3	-
A	anvio\cli\export_contigs.py	3	2	-
A	anvio\cli\import_functions.py	7	3	3
A	.github\workflows\git-hooks.yaml		3	-
A	anvio\cli\import_taxonomy_for_layers.py	13	2	1
A	anvio\cli\import_taxonomy_for_genes.py	3	2	-
A	anvio\cli\import_protein_profile.py	3	2	-
A	.conda\environment.yaml		1	-
A	anvio\cazymes.py	29	2	1
A	anvio\cli\compute_gene_cluster_homogeneity.py	27	3	1
A	anvio\cli\export_items_order.py	13	2	-