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anvio
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Name
Complexity
Churn
Issues
A
anvio\cli\annotate_fragmented_genes.py
1 8 -
A
anvio\cli\reformat_fasta.py
83 2 5
A
anvio\cli\gen_fasta_txt.py
5 1 -
A
anvio\cli\reorient_genomes.py
1 6 -
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anvio\cli\delete_misc_data.py
6 3 -
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anvio\cli\report_inversions.py
1 2 1
A
anvio\cli\gen_function_matrix.py
2 1 -
A
anvio\cli\run_cazymes.py
1 2 -
A
anvio\agglomeration.py
39 2 1
A
anvio\cli\run_globdb_functions.py
1 1 -
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anvio\cli\gen_functions_per_group_stats_output.py
1 3 -
A
anvio\cli\run_interacdome.py
1 2 -
A
anvio\cli\dereplicate_genomes.py
1 4 -
A
anvio\cli\get_codon_usage_bias.py
72 5 3
A
anvio\cli\estimate_metabolic_independence.py
13 2 1
A
anvio\cli\get_collection_info.py
1 2 -
A
anvio\cli\get_coverage_from_bam.py
41 3 2
A
anvio\cli\compute_completeness.py
9 5 -
A
anvio\cli\estimate_metabolism.py
7 5 -
A
anvio\cli\get_hmm_hits_per_gene_call.py
5 3 -