jmmut/eva-pipeline

develop

eva-pipeline

Grade	Name	Complexity	Churn	Issues
A	src\main\java\uk\ac\ebi\eva\commons\models\data\Variant.java	67	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\readers\MongoDbCursorItemReader.java	21	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\readers\VcfReaderConfiguration.java	4	3	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\writers\VariantMongoWriter.java	5	9	-
A	src\main\java\uk\ac\ebi\eva\pipeline\jobs\steps\tasklets\PopulationStatisticsLoaderStep.java	12	3	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\PostgreDataSourceConfiguration.java	1	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\jobs\steps\tasklets\SingleStudyVariantsDropperStep.java	1	2	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\readers\UnwindingItemReader.java	6	1	-
A	src\main\java\uk\ac\ebi\eva\pipeline\listeners\SkippedItemListener.java	3	3	-
A	install-dependencies.sh		4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\readers\VariantsMongoReader.java	10	1	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\writers\VariantSourceEntityMongoWriter.java	2	3	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\writers\GeneWriterConfiguration.java	1	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\writers\VepAnnotationFileWriter.java	5	2	-
A	src\main\java\uk\ac\ebi\eva\pipeline\model\PopulationStatistics.java	47	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\readers\VariantAnnotationReaderConfiguration.java	1	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\writers\VepAnnotationMongoWriter.java	15	6	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\writers\VariantAnnotationWriterConfiguration.java	1	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\jobs\AggregatedVcfJob.java	0	11	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\writers\VariantWriterConfiguration.java	3	5	-