jmmut/eva-pipeline

develop

eva-pipeline

Grade	Name	Complexity	Churn	Issues
A	src\main\java\uk\ac\ebi\eva\pipeline\io\readers\VcfHeaderReader.java	17	5	-
A	src\main\java\uk\ac\ebi\eva\pipeline\jobs\flows\ParallelStatisticsAndAnnotationFlow.java	0	1	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\mappers\AnnotationLineMapper.java	33	5	-
A	src\main\java\uk\ac\ebi\eva\pipeline\jobs\flows\PopulationStatisticsOptionalFlow.java	1	3	-
A	src\main\java\uk\ac\ebi\eva\commons\models\converters\data\VariantStatsToDBObjectConverter.java	3	1	-
A	src\main\java\uk\ac\ebi\eva\pipeline\jobs\steps\AnnotationMetadataStep.java	2	1	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\readers\VcfReader.java	3	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\readers\VariantsMongoReaderConfiguration.java	1	1	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\writers\GeneWriter.java	1	5	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\ChunkSizeCompletionPolicyConfiguration.java	1	2	-
A	src\main\java\uk\ac\ebi\eva\pipeline\jobs\steps\DropSingleStudyVariantsStep.java	2	1	-
A	src\main\java\uk\ac\ebi\eva\commons\models\converters\data\DBObjectToVariantAnnotationConverter.java	38	1	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\writers\StatisticsMongoWriter.java	1	3	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\readers\VcfReaderConfiguration.java	4	3	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\writers\VariantMongoWriter.java	5	9	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\writers\VariantSourceEntityMongoWriter.java	2	3	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\writers\GeneWriterConfiguration.java	1	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\writers\VepAnnotationFileWriter.java	5	2	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\writers\VepAnnotationMongoWriter.java	15	6	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\writers\VariantAnnotationWriterConfiguration.java	1	4	-