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cg\services\orders\validation\order_types\taxprofiler\models\order.py
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cg\services\orders\validation\order_types\fastq\models\order.py
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cg\services\deliver_files\tag_fetcher\abstract.py
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cg\services\deliver_files\deliver_files_service\error_handling.py
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cg\cli\upload\gisaid.py
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cg\services\orders\validation\order_types\pacbio_long_read\models\order.py
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cg\services\orders\validation\order_types\microsalt\models\order.py
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tests\cli\workflow\conftest.py
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cg\services\orders\validation\rules\case_sample\pedigree\validate_pedigree.py
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cg\services\deliver_files\file_formatter\path_name\nested_structure.py
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tests\cli\workflow\mip\test_cli_mip_rna_link.py
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tests\cli\workflow\fastq\test_fastq_base.py
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cg\models\balsamic\metrics.py
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cg\services\analysis_starter\tracker\implementations\microsalt.py
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cg\cli\utils.py
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tests\cli\upload\test_cli_upload_genotype.py
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cg\store\filters\status_analysis_filters.py
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tests\cli\set\test_cli_set_cases.py
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alembic\versions\2025_05_13_be6552c03d7f_add_top_up_case_action_and_analysis_trailblazer_id.py
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tests\cli\upload\test_cli_upload_gens.py
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