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A
.pre-commit-config.yaml
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cg\meta\delivery_report\templates\macros\sample_prep.html
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cg\services\orders\validation\order_types\metagenome\validation_rules.py
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cg\meta\delivery_report\templates\macros\uploaded_files\balsamic_uploaded_files.html
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cg\services\analysis_starter\configurator\file_creators\nextflow\params_file\taxprofiler.py
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cg\meta\delivery_report\templates\macros\uploaded_files\nallo_uploaded_files.html
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tests\cli\workflow\fluffy\test_cli_run.py
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cg\meta\delivery_report\templates\macros\uploaded_files\rnafusion_uploaded_files.html
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cg\services\delivery_message\messages\__init__.py
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cg\meta\delivery_report\templates\partials\footer.html
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tests\cli\workflow\fluffy\conftest.py
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tests\fixtures\analysis\nf-analysis\pipeline_params.yaml
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tests\fixtures\analysis\nallo\nallo_fixture_for_metrics_deliverables.yaml
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tests\cli\workflow\balsamic\test_compound_commands.py
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cg\utils\time.py
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cg\services\sequencing_qc_service\__init__.py
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cg\services\orders\validation\order_types\fluffy\constants.py
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cg\services\deliver_files\file_formatter\destination\models.py
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cg\meta\workflow\mutant\quality_controller\__init__.py
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cg\cli\workflow\mip\options.py
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