assemblerflow/flowcraft

master

flowcraft

Grade	Name	Complexity	Churn	Issues
A	flowcraft\templates\process_concoct.py	17	1	-
A	flowcraft\templates\process_assembly_mapping.py	54	3	1
A	flowcraft\templates\process_assembly.py		3	1
A	flowcraft\templates\process_abricate.py		3	-
A	flowcraft\templates\pipeline_status.py	12	2	-
A	flowcraft\templates\pATLAS_consensus_json.py	8	2	-
A	flowcraft\templates\metaspades.py	18	3	-
A	flowcraft\templates\megahit.py	29	3	-
A	flowcraft\templates\mashscreen2json.py	6	3	-
A	flowcraft\templates\mashdist2json.py	9	5	-
A	flowcraft\templates\mapping2json.py	18	4	-
A	flowcraft\templates\integrity_coverage.py	39	3	1
A	flowcraft\templates\flowcraft_utils\flowcraft_base.py	17	1	-
A	flowcraft\templates\fastqc_report.py	66	3	-
A	flowcraft\templates\fastqc.py	16	2	-
A	flowcraft\templates\fasta_spliter.py	4	1	-
A	flowcraft\templates\downsample_fastq.py	12	2	-
A	flowcraft\templates\dengue_typing_reads.py	34	1	4
A	flowcraft\templates\dengue_typing_assembly.py	27	1	4
A	flowcraft\templates\compile_reports.py	11	2	-