master
GeneLab_Data_Processing
Repository badge with A rating
View on GitHub
Grade
Name
Complexity
Churn
Issues
C
RNAseq\Workflow_Documentation\NF_RCP-F\workflow_code\bin\create_table_v2.py
177 2 6
A
RNAseq\Workflow_Documentation\NF_RCP-F\workflow_code\bin\format_software_versions.py
48 3 -
A
Metagenomics\Illumina\Workflow_Documentation\SW_MGIllumina\workflow_code\scripts\combine-all-gene-tables.py
38 1 -
A
RNAseq\Workflow_Documentation\NF_RCP-F\workflow_code\bin\generate_publish_to_repo_excel.py
29 1 3
A
RNAseq\Workflow_Documentation\NF_RCP-F\workflow_code\bin\retrieve_references.py
19 1 2
A
RNAseq\Workflow_Documentation\NF_RCP-F\workflow_code\bin\assess_strandedness.py
16 1 5
A
Metagenomics\Illumina\Workflow_Documentation\SW_MGIllumina\workflow_code\scripts\combine-gene-level-coverages-annots-and-tax-per-group.py
13 1 -
A
RNAseq\Workflow_Documentation\NF_RCP-F\workflow_code\bin\generate_md5sum_files.py
10 1 1
A
RNAseq\Workflow_Documentation\NF_RCP-F\workflow_code\bin\get_max_readlength_from_fastqc.py
5 1 -
A
RNAseq\Workflow_Documentation\NF_RCP-F\workflow_code\bin\update_curation_table.py
4 1 -
A
RNAseq\Workflow_Documentation\NF_RCP-F\workflow_code\bin\VV_data_assets.py
3 1 -
A
Amplicon\454-and-IonTorrent\Workflow_Documentation\SW_Amp454IonTor\workflow_code\envs\vsearch.yaml
 1 -
A
Amplicon\Illumina\GLDS_Processing_Scripts\GLDS-191\GLDS_version_3\full-command-line-log.sh
 1 -
A
Amplicon\Illumina\GLDS_Processing_Scripts\GLDS-200\GLDS_version_2\16S-full-R-processing.R
 1 1
A
Amplicon\Illumina\GLDS_Processing_Scripts\GLDS-200\GLDS_version_2\ITS-full-R-processing.R
 1 1
A
Amplicon\454-and-IonTorrent\Workflow_Documentation\SW_Amp454IonTor\workflow_code\envs\R.yaml
 1 -
A
Amplicon\454-and-IonTorrent\Workflow_Documentation\SW_Amp454IonTor\workflow_code\scripts\454-IonTorrent-R-processing.R
 1 -
A
Amplicon\Illumina\GLDS_Processing_Scripts\GLDS-200\GLDS_version_2\full-command-line-log.sh
 1 -
A
Amplicon\Illumina\GLDS_Processing_Scripts\GLDS-280\GLDS_version_2\environment.yml
 1 -
A
.github\workflows\markdown-link-check.yml
 1 -