2lambda123/cbioportal

master

cbioportal

Grade	Name	Complexity	Churn	Issues
A	core\src\main\java\org\mskcc\cbio\portal\scripts\CalculateMutationFrequencies.java	14	1	1
A	core\src\main\java\org\mskcc\cbio\portal\scripts\ConsoleRunnable.java	15	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\ConvertCosmicVcfToMaf.java	9	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\ConvertGeneIds.java	5	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\ConvertGeneSymbols.java	5	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\ConvertSvsImages.java		1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\CutInvalidCases.java	15	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\DeleteAllSampleLists.java	1	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\DumpPortalInfo.java	18	1	-
C	core\src\main\java\org\mskcc\cbio\portal\scripts\ExportDataForDownload.java	22	1	13
A	core\src\main\java\org\mskcc\cbio\portal\scripts\ExportProfileData.java	9	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\FilterCases.java	16	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\GeneSetsVerification.java	13	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\GenerateMutationData.java	29	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\GenericAssayMetaUtils.java	2	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\GeneticAlterationImporter.java	6	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\GetAllSampleLists.java	2	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\ImportCaisesClinicalXML.java	115	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\ImportCancerStudy.java	7	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\ImportClinicalData.java	136	1	6