2lambda123/cbioportal

master

cbioportal

Grade	Name	Complexity	Churn	Issues
A	core\src\main\scripts\importer\libImportOncokb.py	77	2	3
A	core\src\main\java\org\mskcc\cbio\portal\dao\DaoSampleProfile.java	45	2	-
A	core\src\main\scripts\importer\updateOncokbAnnotations.py	52	2	1
A	core\src\main\scripts\importer\importOncokbDiscreteCNA.py	41	2	2
A	persistence\persistence-mybatis\src\test\java\org\cbioportal\persistence\mybatis\DiscreteCopyNumberMyBatisRepositoryTest.java	19	2	-
A	persistence\persistence-mybatis\src\main\java\org\cbioportal\persistence\mybatis\ClinicalEventMyBatisRepository.java	7	2	-
A	persistence\persistence-mybatis\src\main\java\org\cbioportal\persistence\mybatis\MutationMapper.java	7	2	-
A	security\security-spring\src\main\java\org\cbioportal\security\spring\authentication\PortalUserDetails.java	5	2	-
A	core\src\main\java\org\mskcc\cbio\portal\web_api\GetMutationData.java	22	2	2
A	core\src\main\java\org\mskcc\cbio\portal\util\GeneticProfileReader.java	46	2	2
A	core\src\main\java\org\mskcc\cbio\portal\util\ExtendedMutationUtil.java	76	2	2
A	persistence\persistence-api\src\main\java\org\cbioportal\persistence\MutationRepository.java	8	2	-
A	persistence\persistence-api\src\main\java\org\cbioportal\persistence\StructuralVariantRepository.java	2	2	-
A	persistence\persistence-api\src\main\java\org\cbioportal\persistence\AlterationRepository.java	4	2	-
A	persistence\persistence-api\src\main\java\org\cbioportal\persistence\util\CustomRedisCache.java	31	2	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\ImportTabDelimData.java	159	2	7
A	core\src\main\java\org\mskcc\cbio\portal\scripts\ImportResourceDefinition.java	52	2	1
A	core\src\main\java\org\mskcc\cbio\portal\servlet\CheckDarwinAccessServlet.java	37	2	1
A	core\src\main\java\org\mskcc\cbio\portal\model\SampleListCategory.java	7	2	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\ImportGenePanelProfileMap.java	25	2	-