2lambda123/cbioportal

master

cbioportal

Grade	Name	Complexity	Churn	Issues
A	core\src\main\java\org\mskcc\cbio\portal\util\Logger.java	2	1	-
A	core\src\main\java\org\mskcc\cbio\portal\util\MissingValues.java	7	1	-
A	core\src\main\java\org\mskcc\cbio\portal\model\ClinicalParameterMap.java	6	1	-
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\GeneSet.java	28	1	2
A	core\src\main\java\org\mskcc\cbio\portal\util\MskWholeSlideViewerTokenGenerator.java	3	1	-
A	core\src\main\java\org\mskcc\cbio\portal\util\MutSigReader.java	25	1	1
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\GeneWithSpec.java	16	1	4
A	core\src\main\java\org\mskcc\cbio\portal\util\MutationCounter.java	21	1	1
A	core\src\main\java\org\mskcc\cbio\portal\dao\DaoGeneticAlteration.java	47	1	-
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\GeneticDataTypes.java	4	1	-
A	core\src\main\java\org\mskcc\cbio\portal\util\MyCancerGenomeLinkUtil.java	18	1	-
A	core\src\main\java\org\mskcc\cbio\portal\util\NaturalOrderComparator.java	29	1	-
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\GeneticTypeLevel.java	12	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\OmaLinkUtil.java	20	1	-
A	core\src\main\java\org\mskcc\cbio\portal\util\OncoPrintSpecificationDriver.java	13	1	-
A	core\src\main\java\org\mskcc\cbio\portal\model\Coexpression.java	18	1	-
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\ListOfOncoPrintLangException.java	2	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\OncoPrintUtil.java	6	1	-
A	core\src\main\java\org\mskcc\cbio\portal\util\OncokbHotspotUtil.java	12	1	1
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\OncoPrintGeneDisplaySpec.java	40	1	6