2lambda123/cbioportal

master

cbioportal

Grade	Name	Complexity	Churn	Issues
A	service\src\main\java\org\cbioportal\service\exception\SampleNotFoundException.java	5	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\drug\internal\PiHelperImporter.java	22	1	-
A	service\src\main\java\org\cbioportal\service\exception\StudyNotFoundException.java	3	1	-
A	service\src\main\java\org\cbioportal\service\impl\AlterationCountServiceImpl.java	14	2	-
A	core\src\test\java\org\mskcc\cbio\portal\util\TestMutSigReader.java	2	1	-
A	service\src\main\java\org\cbioportal\service\impl\AlterationDriverAnnotationServiceImpl.java	2	1	-
A	service\src\main\java\org\cbioportal\service\impl\AlterationEnrichmentServiceImpl.java	3	2	-
A	core\src\main\java\org\mskcc\cbio\portal\dao\DaoCopyNumberSegmentFile.java	9	1	-
A	core\src\main\java\org\mskcc\cbio\portal\dao\GeneticAlterationUtil.java	20	1	-
A	core\src\main\java\org\mskcc\cbio\portal\model\SangerCancerGene.java	29	1	-
A	core\src\main\java\org\mskcc\cbio\portal\scripts\drug\internal\PiHelperResource.java		1	-
A	core\src\test\java\org\mskcc\cbio\portal\util\TestMutationCounter.java	5	1	-
A	service\src\main\java\org\cbioportal\service\impl\CacheServiceImpl.java	10	1	-
A	service\src\main\java\org\cbioportal\service\impl\CacheStatisticsServiceImpl.java	12	1	-
A	core\src\test\java\org\mskcc\cbio\portal\util\TestMutationKeywordUtils.java	2	3	-
A	service\src\main\java\org\cbioportal\service\impl\CancerTypeServiceImpl.java	10	1	-
A	service\src\main\java\org\cbioportal\service\impl\ClinicalAttributeServiceImpl.java	12	1	-
A	core\src\main\java\org\mskcc\cbio\portal\servlet\BioGeneServlet.java	5	1	-
A	core\src\test\java\org\mskcc\cbio\portal\util\TestNaturalOrderComparator.java	1	1	-
A	service\src\main\java\org\cbioportal\service\impl\ClinicalDataServiceImpl.java	25	2	-