2lambda123/cbioportal

master

cbioportal

Grade	Name	Complexity	Churn	Issues
A	core\src\test\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\TestOncoPrintSpecificationInParser.java	57	1	2
A	core\src\main\scripts\prepareBasicPiHelperData.sh		1	2
A	core\src\main\scripts\importer\validateStudies.py	29	1	2
A	core\src\main\scripts\importer\importOncokbDiscreteCNA.py	41	2	2
A	core\src\main\scripts\importer\cbioportal_common.py	104	7	2
A	core\src\main\scripts\hotDeploy.py		1	2
A	core\src\main\java\org\mskcc\cbio\portal\web_api\GetMutationData.java	22	2	2
A	core\src\main\scripts\calculateMutationFrequencies.py		1	2
A	core\src\main\java\org\mskcc\cbio\portal\util\internal\AccessControlImpl.java	12	1	2
A	core\src\main\java\org\mskcc\cbio\portal\util\XssRequestWrapper.java	4	1	2
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\CallOncoPrintSpecParser.java	4	1	2
A	core\src\main\java\org\mskcc\cbio\portal\util\ZScoreUtil.java	8	1	2
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\GeneSet.java	28	1	2
A	core\src\main\java\org\mskcc\cbio\portal\model\ProfileDataSummary.java	57	1	2
A	core\src\main\java\org\mskcc\cbio\portal\util\ServerDetector.java	51	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\UrlUtil.java	20	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\OncokbHotspotUtil.java	12	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\MutSigReader.java	25	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\UserInfo.java	5	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\MutationCounter.java	21	1	1