2lambda123/cbioportal

master

cbioportal

Grade	Name	Complexity	Churn	Issues
A	core\src\main\java\org\mskcc\cbio\portal\util\MutSigReader.java	25	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\MutationCounter.java	21	1	1
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\GeneticTypeLevel.java	12	1	1
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\ListOfOncoPrintLangException.java	2	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\OncokbHotspotUtil.java	12	1	1
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\OncoPrintSpec.java	4	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\ServerDetector.java	51	1	1
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\ParserOutput.java	6	1	1
A	core\src\main\java\org\mskcc\cbio\portal\oncoPrintSpecLanguage\ResultDataTypeSpec.java	25	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\UrlUtil.java	20	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\UserInfo.java	5	1	1
A	core\src\main\java\org\mskcc\cbio\portal\util\WebserviceParserUtils.java	28	1	1
A	persistence\persistence-connections\pom.xml		1	1
A	core\src\main\java\org\mskcc\cbio\portal\model\ExtendedMutation.java	189	2	1
A	persistence\persistence-mybatis\pom.xml		1	1
A	core\src\main\java\org\mskcc\cbio\portal\scripts\AddCaseList.java	13	1	1
A	core\src\main\java\org\mskcc\cbio\portal\scripts\CalculateMutationFrequencies.java	14	1	1
A	core\src\main\java\org\mskcc\cbio\portal\validate\ValidateGistic.java	38	1	1
A	core\src\main\java\org\mskcc\cbio\portal\web_api\GetClinicalData.java	30	1	1
A	core\src\main\java\org\mskcc\cbio\portal\web_api\GetTypesOfCancer.java	9	1	1